About

I'm a PhD candidate at UC San Diego, based at the Salk Institute, building deep learning models to predict how rare and noncoding variants perturb gene regulation in specific immune cell types. I train and benchmark sequence-to-function models and combine them with allele-specific evidence to estimate cell-type-specific variant effects, with a focus on type 1 diabetes and autoimmune disease.

Focus

  • Variant-aware sequence-to-function modeling of chromatin and gene regulation
  • Benchmarking and scaling genomic foundation models for variant effect prediction
  • Single-cell variant effects (scATAC-seq / scRNA-seq)
  • Allele-specific inference and bias correction (ASE; allele-specific chromatin accessibility; WASP2)

Journey

I took a nontraditional route into science: I dropped out twice, worked construction and restaurant jobs, and spent two years abroad before restarting at community college. Research clicked for me through field ecology, and that momentum took me from Cal State San Marcos to UC San Diego for my PhD. That path left me with a bias toward clarity, rigor, and doing things the hard way when it matters. More →

Scorpion Handstand in Dharamsala, India
Vrschikasana / Scorpion — Dharamsala, India (2012)

Outside the lab

I stay active with yoga, tennis, and boxing. Zazen practice keeps me grounded: cognition is fragile, confidence is cheap, and rigor matters.

I run a 60-member Discord tennis community (2–3 USTA teams/season), with automated scheduling and availability tracking.

Awards & Honors

2025

Salk MoonShot Pilot Grant

$200k AWS Award

2025

UC President's Pre-Professoriate Fellowship

2-3 selected per UC campus annually

2024-27

NIH F31 NRSA

Ruth L. Kirschstein National Research Service Award

2023-25

Human Genetics Scholar Award

American Society of Human Genetics

2021-23

STARs Fellow

Summer Training Academy for Research Success, UCSD

2020-26

Sloan Scholar Fellowship

Alfred P. Sloan Foundation UCEM

2019

CSU Trustees' Award for Outstanding Achievement

1 of 23 selected system-wide · CSU's highest student honor

2018

Phi Theta Kappa All-USA Academic Team

1 of 20 selected nationally · Most prestigious community college honor

Selected Work

Multiomic QTL Mapping

Phenotypic complexity of GWAS loci and causal variant prioritization (Cell Genomics, 2025)

Comprehensive Molecular Impact Mapping

Mapping common and rare variant effects at GWAS loci (bioRxiv, 2025)

GenVarLoader

Accelerated dataloader for deep learning in personalized genomics (bioRxiv, 2025)

SNV Discovery from ATAC-seq

Discovering single nucleotide variants and indels from bulk and single-cell ATAC-seq (Nucleic Acids Research, 2021)

Connect

I'm always interested in discussing research at the intersection of computational biology and AI.